Rename parameter for certification to "certificate"

src/main/scala/daisy/Main.scala

@@ -19,7 +19,7 @@ object Main {
   val optionPrintToughSMTCalls = FlagOptionDef("print-tough-smt-calls",
     "If enabled, will print SMT queries which take longer to file for inspection.")
 
-  val optionValidators = ChoiceOptionDef("verify", "Wether to verify and which verifier to use",Set("coq","hol"),"coq")
+  val optionValidators = ChoiceOptionDef("certificate", "Wether to certify and which theorem prover to use",Set("coq","hol"),"coq")
 
   val globalOptions: Set[CmdLineOptionDef[Any]] = Set(
     FlagOptionDef("help",       "Show this message."),
@@ -188,10 +188,10 @@ object Main {
       backend.CodeGenerationPhase
     } else if (ctx.findOption(optionValidators) != None) {
       analysis.SpecsProcessingPhase andThen
-      transform.SSATransformerPhase andThen
       analysis.RangeErrorPhase andThen
       InfoPhase andThen
-      backend.CertificatePhase
+      backend.CertificatePhase andThen
+      backend.CodeGenerationPhase
     } else {
       analysis.SpecsProcessingPhase andThen
       analysis.RangeErrorPhase andThen